Targeted sequencing of Rubus okinawensis - SRA

SRX22463504: Targeted sequencing of Rubus okinawensis
1 ILLUMINA (Illumina HiSeq 3000) run: 483,579 spots, 145.1M bases, 61.7Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 6

PRJNA1022025 • SRP471042 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Rubus okinawensis

SAMN37580631 • SRS19477507 • All experiments • All runs

Organism: Rubus okinawensis

Library:

Name: 5bd185ea-c275-4196-bc51-0a2190aba347

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 483,579 spots, 145.1M bases, 61.7Mb

Run	# of Spots	# of Bases	Size	Published
SRR26764611	483,579	145.1M	61.7Mb	2023-11-09

ID:: 30449293

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